SciBite Elsevier curation jamboree for World Psoriasis Day
Summary
SciBite Elsevier expanded its psoriasis-related concept coverage on October 29th for World Psoriasis Day. The initiative aimed to identify and integrate missing psoriasis-related terms into SciBite's VOCabs, which are specialized vocabularies for named entity recognition (NER) in healthcare and pharmaceuticals. Using their TERMite NER engine, SciBite scanned documents and articles to find approximately 100 new concepts, synonyms, and context-appropriate curations, such as "chronic plaque-type psoriasis" and "flaky patches of skin." This enrichment enhances information recall for customers in drug discovery and manufacturing. Additionally, SciBite curator Paola contributed to the bio-ontology community by reviewing and suggesting improvements to the representation of psoriasis within the Mondo Disease Ontology.
Key takeaway
For NLP Engineers developing healthcare search solutions, regularly curating and expanding specialized vocabularies is crucial. Your systems will achieve higher recall and precision by integrating specific, context-appropriate terms like "chronic plaque-type psoriasis" and their synonyms. Consider participating in community efforts like the Mondo Disease Ontology to improve public resources, which can indirectly benefit your own data standardization and literature discovery processes.
Key insights
Expanding specialized vocabularies improves information recall and contributes to public bio-ontology resources.
Principles
- FAIR philosophy guides vocabulary development.
- Maximal recall requires comprehensive vocabularies.
Method
SciBite used its TERMite NER engine to scan psoriasis-related documents, identify missing terms, and augment VOCabs with new entities and synonyms, while also contributing improvements to the Mondo Disease Ontology.
In practice
- Use NER engines to identify vocabulary gaps.
- Contribute identified issues to public ontologies.
Topics
- Named Entity Recognition
- Biocuration
- Disease Ontology
- Psoriasis
- Healthcare Informatics
Best for: NLP Engineer, AI Scientist, AI Data Scientist, Research Scientist, Data Engineer
Related on AIssential
Editorial summary, takeaway, and curation by AIssential. Original article published by SciBite.